Information for 12-AAGAGGTATT (Motif 26)

C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A T A G C G T A C A G C T A G T C C G A T A C G T
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.822
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.5 +/- 23.6bp
Average Position of motif in Background41.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGGTATT-
TAAGGCGTCTTG
 A C G T C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

JUN/MA0488.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAGAGGTATT
AAGATGATGTCAT
 A C G T A C G T A C G T C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAGAGGTATT-
AAAGATGATGTCATC
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

Hoxb5/MA0904.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGAGGTATT------
ATGNGCTAATTANCNT
 C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T

PH0060.1_Hoxb5/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGAGGTATT------
ATGNGCTAATTANCNT
 C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGAGGTATT------
NTNAGGTAATTACCTT
 C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGAGGTATT
ATGATGCAAT
 C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AAGAGGTATT--
----GKTAATGR
 C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGAGGTATT
MTGATGCAAT
 C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

ATF4/MA0833.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGAGGTATT-
GGATGATGCAATA
 A C G T A C G T C G T A C G T A A C T G C T G A A C T G A C T G A C G T C G T A C G A T A C G T A C G T
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A