Information for 8-TCCCTAAAGC (Motif 16)

A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C
Reverse Opposite:
C T A G A T G C A C G T A C G T C A G T C T G A A C T G C T A G C T A G T C G A
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.846
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets58.2 +/- 21.5bp
Average Position of motif in Background43.6 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCCTAAAGC-
NGYCATAAAWCH
 A C G T A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCCCTAAAGC
ATGCCCTGAGGC
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCCCTAAAGC-
CGCCTCAGGCA
 A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTAAAGC
WTGSCCTSAGGS
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCCTAAAGC-
AGCCTCAGGCA
 A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCCCTAAAGC-
AGCCTCAGGCA
 A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCCCTAAAGC---
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C A C G T A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCCCTAAAGC---
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCCCTAAAGC-
GGCCATAAATCA
 A C G T A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCCCTAAAGC--
GGCCATAAATCAC
 A C G T A C G T A G T C A G T C A G T C A G C T G C T A C G T A C G T A A T C G A G T C A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C