Information for 3-TTGCCAAACT (Motif 19)

A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T
Reverse Opposite:
C T G A A T C G A G C T A C G T C G A T A C T G A C T G G T A C G T C A C G T A
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.834
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif181.5
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets50.2 +/- 28.3bp
Average Position of motif in Background47.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAACT
GGTGCCAAGT-
 A C G T A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTGCCAAACT
TTGCCAAG--
 A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAACT
CGTGCCAAG--
 A C G T A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTGCCAAACT
-TGCCAA---
 A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAACT
ATTGCACAATA
 A C G T A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAACT
ATTGCGCAAC-
 A C G T A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T
T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTGCCAAACT
TTGCAACATN
 A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTGCCAAACT---
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTGCCAAACT
ATGCCAACC-
 A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCAAACT
ATTGCGCAAT-
 A C G T A C G T A C G T A C T G G T A C G T A C G C T A T G C A C T G A A T G C G A C T
T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T