Information for 9-AGCAAGATTTATTTCT (Motif 14)

C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
Reverse Opposite:
C T G A A T C G C T G A T G C A C T G A A C G T C G T A C G T A G T C A G A C T G T A C A C G T A C G T A C T G G T A C A G C T
p-value:1e-10
log p-value:-2.311e+01
Information Content per bp:1.690
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif23.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets61.6 +/- 26.1bp
Average Position of motif in Background50.6 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAGATTTATTTCT
NNTNNCAATATTAG-----
 A C G T A C G T A C G T C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAGATTTATTTCT
NNTNNCAATATTAG-----
 A C G T A C G T A C G T C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCAAGATTTATTTCT
GAGCAACAGGTGGTT--
 A C G T C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAGATTTATTTCT
TTAAGAACAATAAATT-----
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAGATTTATTTCT
TNNAGAACAATANATNN----
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AGCAAGATTTATTTCT
HNRAATCAAT----------
 A C G T A C G T A C G T A C G T C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AGCAAGATTTATTTCT
TTGACCGAGAATTCC----
 A C G T A C G T A C G T C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.50
Offset:-8
Orientation:forward strand
Alignment:--------AGCAAGATTTATTTCT
GCTGAGTCAGCAATTTTT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAGATTTATTTCT
TAGTGAACAATAGATTT----
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGCAAGATTTATTTCT
---NTGATTTATGGCC
 C T G A A C T G G T A C C G T A C G T A A C T G C G T A C A G T A C G T C G A T G T C A G A C T A C G T A G C T A T G C G A C T
A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C