Information for 5-RGAYTKTAAGKGT (Motif 8)

C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C G T A C G T A C C G A T A C G T C G T A G T C A C T G A C T G A A C G T A G T C A G C T
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.856
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.9 +/- 36.7bp
Average Position of motif in Background37.1 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:RGAYTKTAAGKGT-
-----TTAAGTGGN
 C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:RGAYTKTAAGKGT-
-----TTAAGTGGT
 C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:RGAYTKTAAGKGT--
-----NTAATKGTTT
 C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RGAYTKTAAGKGT----
-AAATTCAAGTGGNTTN
 C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:RGAYTKTAAGKGT
-----TTAAGTGC
 C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

PH0115.1_Nkx2-6/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RGAYTKTAAGKGT----
-AATNTTAAGTGGNTNN
 C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:RGAYTKTAAGKGT
-----CTAATKGV
 C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

Nkx2-5/MA0063.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:RGAYTKTAAGKGT
-----TTAATTG-
 C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:RGAYTKTAAGKGT-
----NTCAAGTGGN
 C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RGAYTKTAAGKGT-----
-NTNNTTAAGTGGTTANN
 C T G A A C T G C G T A A G C T A G C T A C G T A C G T G T C A C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G