Information for 10-ATGCGCATAA (Motif 23)

T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A
Reverse Opposite:
C A G T C G A T G T C A G A C T A T C G A T G C C A T G G T A C G T C A A C G T
p-value:1e-7
log p-value:-1.841e+01
Information Content per bp:1.678
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif232.4
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets52.3 +/- 24.7bp
Average Position of motif in Background52.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATGCGCATAA
GCGCATGCGCAC--
 A C G T A C G T A C G T A C G T T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATGCGCATAA
TAATTTGCATAA
 A C G T A C G T T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGCGCATAA
ATTTGCATA-
 T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGCGCATAA
ATTTGCATAA
 T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATGCGCATAA
GCGCATGCGCAG--
 A C G T A C G T A C G T A C G T T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATGCGCATAA
TAATTTGCATAA
 A C G T A C G T T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F3/MA0788.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATGCGCATAA-
AAATTAGCATAAT
 A C G T A C G T T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATGCGCATAA
GCGCCTGCGCA---
 A C G T A C G T A C G T A C G T T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGCGCATAA-
AATTTGCATANT
 A C G T T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGCGCATAA--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T T G C A C A G T A C T G G T A C T A C G T A G C C G T A C A G T G C T A G T C A A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A