Information for 5-GSCTGCGACTAGGTTG (Motif 20)

A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
Reverse Opposite:
A T G C C G T A G C T A G T A C A G T C G C A T C G T A T C A G C G A T A G T C C A T G A G T C C G T A A C T G A T C G A G T C
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.747
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 20.9bp
Average Position of motif in Background28.6 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GSCTGCGACTAGGTTG
-GCTGTG---------
 A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GSCTGCGACTAGGTTG
TWGTCTGV----------
 A C G T A C G T A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GSCTGCGACTAGGTTG
TGCCTGAGGCN------
 A C G T A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GSCTGCGACTAGGTTG
TGCTGTGATTT-----
 A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GSCTGCGACTAGGTTG
ATTGCCTGAGGCAAT----
 A C G T A C G T A C G T A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GSCTGCGACTAGGTTG
NGCCTGAGGCN------
 A C G T A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------GSCTGCGACTAGGTTG
GGGGCTYGKCTGGGA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GSCTGCGACTAGGTTG
NGCCTNAGGCN------
 A C G T A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GSCTGCGACTAGGTTG
ANTGCCTGAGGCAAN----
 A C G T A C G T A C G T A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GSCTGCGACTAGGTTG
-GCAGTGATTT-----
 A C T G A T G C A G T C A C G T A C T G G A T C A C T G C G T A A G T C G A C T C G T A C T A G A C T G C G A T C G A T A T C G
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T