p-value: | 1e-5 |
log p-value: | -1.275e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.46% |
Number of Background Sequences with motif | 5.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 58.2 +/- 27.4bp |
Average Position of motif in Background | 71.9 +/- 20.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 1 |
Score: | 0.78 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTGCTCTGG-- NNCGTTGCTATGGNN |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 2 |
Score: | 0.74 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------GTTGCTCTGG------ NTNNNNNGTTGCTANGGNNCANA |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTGCTCTGG-- NCCGTTGCTANGNGN |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.72 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTTGCTCTGG CTGTTGCTAGGS |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 5 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTTGCTCTGG---- GTTGCCATGGNAAC |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 6 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGCTCTGG--- NGTTGCCATGGCAA |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGCTCTGG--- GGTTGCCATGGCAA |
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RFX5/MA0510.2/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGCTCTGG----- CGTTGCCATGGCAACG |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 9 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTTGCTCTGG----- GTTGCCATGGCAACM |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTTGCTCTGG---- CGGTTGCCATGGCAAC |
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