Information for 4-CMHCATGGCG (Motif 17)

A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C C T A G A G T C A G T C C G T A A G C T A T C G C T A G A C G T A T C G
p-value:1e-9
log p-value:-2.119e+01
Information Content per bp:1.774
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.99%
Number of Background Sequences with motif545.5
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets48.2 +/- 24.0bp
Average Position of motif in Background52.4 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:CMHCATGGCG---
--TAATGGCGGNC
 A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CMHCATGGCG--
CAAGATGGCGGC
 A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CMHCATGGCG--
CAAGATGGCGGC
 A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CMHCATGGCG-------
NAGANTGGCGGGGNGNA
 A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CMHCATGGCG-------
NNNNTTGGCGCCGANNN
 A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CMHCATGGCG-------
NNNNTTGGCGCCGANNN
 A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CMHCATGGCG-
---GATGACGT
 A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CMHCATGGCG--
---NTTGGCANN
 A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CMHCATGGCG----
------GGCGCGCT
 A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CMHCATGGCG
----TTGGCA
 A T G C T G C A G A T C A T G C C T G A A C G T A C T G A C T G A G T C A C T G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A