Information for 2-CSCCAAGTCA (Motif 9)

T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A
Reverse Opposite:
C G A T C T A G G C T A G T A C G A C T C A G T A C T G C A T G T A G C A T C G
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.616
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif9.22%
Number of Background Sequences with motif1884.7
Percentage of Background Sequences with motif4.03%
Average Position of motif in Targets49.7 +/- 24.1bp
Average Position of motif in Background50.6 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CSCCAAGTCA-
--AAAAGTCAA
 T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

CREB3/MA0638.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CSCCAAGTCA---
GTGCCACGTCATCA
 A C G T T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A A C G T A C G T A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CSCCAAGTCA
TGCCAA----
 T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CSCCAAGTCA--
AATGCCACGTCATC
 A C G T A C G T T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A A C G T A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

RREB1/MA0073.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CSCCAAGTCA----------
CCCCAAACCACCCCCCCCCA
 T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

CREB3L1/MA0839.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CSCCAAGTCA---
ATGCCACGTCATCA
 A C G T T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A A C G T A C G T A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CSCCAAGTCA
CGTGCCAAG---
 A C G T A C G T T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CSCCAAGTCA
BTCAAGGTCA
 T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CSCCAAGTCA
GGTGCCAAGT--
 A C G T A C G T T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CSCCAAGTCA
CGCCCCCTGACA
 A C G T A C G T T A G C A T C G G T A C T G A C G T C A C T G A C A T G C G A T G A T C G C T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A