Information for 2-GGGAVTTGTAGTT (Motif 4)

A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T
Reverse Opposite:
C T G A G T C A G T A C A G C T G T C A A G T C C G T A G T C A A G C T A G C T A G T C T A G C T A G C
p-value:1e-11
log p-value:-2.543e+01
Information Content per bp:1.680
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif261.4
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets51.0 +/- 25.2bp
Average Position of motif in Background50.6 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GGGAVTTGTAGTT
GGGAATTGTAGT-
 A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.84
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAVTTGTAGTT
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.82
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAVTTGTAGTT
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGGAVTTGTAGTT-
----NNTGTGGTTT
 A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GGGAVTTGTAGTT--
-----CTGTGGTTTN
 A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGGAVTTGTAGTT--
---NNHTGTGGTTWN
 A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGGAVTTGTAGTT-
----GCTGTGGTTT
 A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGAVTTGTAGTT-
---GTCTGTGGTTT
 A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGGAVTTGTAGTT-
----TTTGCGGTTT
 A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T A C G T
A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGGAVTTGTAGTT-
-----TTGCGGTTT
 A C T G A T C G T A C G C T G A T C G A C A G T C G A T T A C G C A G T T C G A A C T G C A G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T