Information for 9-AAAAAAACCAGGA (Motif 18)

C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A
Reverse Opposite:
C G A T G T A C A G T C A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T C G A T
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.835
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif27.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets41.4 +/- 21.1bp
Average Position of motif in Background41.3 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAACCAGGA
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAACCAGGA
AACAAACAACAAGAG
 A C G T A C G T C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

POL007.1_BREd/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAAAAAACCAGGA
-NANANAC-----
 C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A
A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAACCAGGA
TGACANARRCCAGRC
 A C G T A C G T C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AAAAAAACCAGGA
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAAAAACCAGGA--
-AAAAAATCAATAAT
 C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A A C G T A C G T
A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAACCAGGA
GTTCAAAAAAAAAATTC-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAAAAAACCAGGA
-AAACAAACATTC
 C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAAAAAACCAGGA
-AAATAAACA---
 C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AAAAAAACCAGGA---
------ANCAGGATGT
 C G T A C G T A C G T A C G T A G T C A G T C A C G T A A G T C G T A C G T C A A C T G C A T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T