Information for 4-CGCAACAATG (Motif 6)

T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G
Reverse Opposite:
G T A C G T C A G C A T C A G T A C T G G A C T A C G T A T C G G A T C A C T G
p-value:1e-11
log p-value:-2.671e+01
Information Content per bp:1.674
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.11%
Number of Background Sequences with motif477.3
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets49.6 +/- 25.5bp
Average Position of motif in Background51.3 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CGCAACAATG-
-VRRACAAWGG
 T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CGCAACAATG-
-RNAACAATGG
 T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G A C G T
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CGCAACAATG-
-VRAACAATGG
 T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G A C G T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:CGCAACAATG
----ACAAAG
 T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CGCAACAATG-----
AATGAACAATGGAATT
 A C G T T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CGCAACAATG--
---GACAATGNN
 T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CGCAACAATG-
---AACAAAGG
 T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G A C G T
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGCAACAATG--
--GAACAATGGN
 T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G A C G T A C G T
A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGCAACAATG-
-GGAACAAAGR
 T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G A C G T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGCAACAATG-
-AAAACAATGG
 T G A C C T A G T A G C T G C A C T G A T G A C G T C A C G T A C A G T A C T G A C G T
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G