Information for 2-GAAACAGGAA (Motif 4)

A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A
Reverse Opposite:
C G A T A C G T A T G C T G A C A G C T A T C G A C G T A C G T A G C T G T A C
p-value:1e-11
log p-value:-2.720e+01
Information Content per bp:1.732
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif445.4
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets51.2 +/- 27.8bp
Average Position of motif in Background51.0 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GAAACAGGAA--
--AACAGGAAGT
 A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A A C G T A C G T
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GAAACAGGAA--
--NACAGGAAAT
 A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A A C G T A C G T
A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAAACAGGAA--
GWAAYHTGAKMC
 A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A A C G T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GAAACAGGAA---
---ACAGGAAGTG
 A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GAAACAGGAA
---AGAGGAA
 A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A
A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GAAACAGGAA--
--AACCGGAAGT
 A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A A C G T A C G T
A C G T A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GAAACAGGAA-
---ACCGGAAG
 A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A A C G T
A C G T A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G

ETV2/MA0762.1/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GAAACAGGAA---
--AACCGGAAATA
 A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A A C G T A C G T A C G T
A C G T A C G T C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAAACAGGAA--
GWAAYHTGABMC
 A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A A C G T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAAACAGGAA--
GAAASYGAAASY
 A C T G C T G A T G C A C G T A A T G C T C G A A C T G T A C G C G T A G C T A A C G T A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T