Information for 6-GGTCCTTAAA (Motif 17)

A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A
Reverse Opposite:
C A G T A C G T C G A T T G C A C G T A C T A G A C T G C G T A A G T C T A G C
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.849
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif31.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets31.1 +/- 24.7bp
Average Position of motif in Background41.6 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GGTCCTTAAA---
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGTCCTTAAA-
GGTCGTAAAAT
 A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A A C G T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

Hoxa11/MA0911.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGTCCTTAAA--
GGTCGTAAAATT
 A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A A C G T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GGTCCTTAAA-
-GTCGTAAAAT
 A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A A C G T
A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGTCCTTAAA-
GGTCGTAAAAA
 A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGTCCTTAAA-
-GTCGTAAAAA
 A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A A C G T
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGTCCTTAAA----
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGTCCTTAAA---
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGTCCTTAAA---
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGTCCTTAAA-
AGTCGTAAAAA
 A T C G C T A G A C G T A G T C A G T C A C G T A C G T C G T A C G T A G C T A A C G T
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A