Information for 6-TGCCYGCCSTCAY (Motif 10)

A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
Reverse Opposite:
C T A G A C G T A C T G G T C A A T C G A C T G A C T G G T A C C T A G A C T G A C T G A G T C C G T A
p-value:1e-10
log p-value:-2.377e+01
Information Content per bp:1.892
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.3 +/- 26.6bp
Average Position of motif in Background43.8 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGCCYGCCSTCAY
---CTGCCCGCA-
 A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCCYGCCSTCAY
ATGCCCACC-----
 A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCCYGCCSTCAY
TTTCCCGCCMAV--
 A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCCYGCCSTCAY
TGACAGCTGTCA-
 A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCCYGCCSTCAY
TTCCCGCCWG---
 A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCCYGCCSTCAY
NNTTCCCGCCC----
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCCYGCCSTCAY
ATGCCAACC-----
 A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCCYGCCSTCAY
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGCCYGCCSTCAY
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

TGIF2/MA0797.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCCYGCCSTCAY
TGACAGCTGTCA-
 A C G T A C T G A G T C A G T C A G T C A C T G A G T C A G T C A T G C A C G T A G T C C G T A G A T C
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T