Information for 6-CCTGCTCTAA (Motif 8)

A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A
Reverse Opposite:
A G C T C G A T C G T A A C T G C G T A A C T G T G A C C G T A A C T G T C A G
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.846
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif200.5
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets47.9 +/- 30.5bp
Average Position of motif in Background47.6 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCTAA
CCCCCTGCTGTG-
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCTCTAA
SNGCACCTGCHS---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTGCTCTAA----
--GGCTCYAKCAYC
 A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCTAA--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCTAA--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCTGCTCTAA-----
AGGACGCTGTAAAGGGA
 A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCTGCTCTAA
--NGCTN---
 A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCTGCTCTAA-----
AAGACGCTGTAAAGCGA
 A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCTGCTCTAA-----
AAGACGCTGTAAAGCGA
 A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCTAA
NCACCTGTN----
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T G T A C G C A T C G T A C T G A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T