Information for 2-GGTAACCACA (Motif 2)

C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A
Reverse Opposite:
G C A T A C T G G A C T C A T G T C A G A G C T G A C T C G T A G A T C G T A C
p-value:1e-17
log p-value:-3.977e+01
Information Content per bp:1.665
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif7.42%
Number of Background Sequences with motif945.1
Percentage of Background Sequences with motif1.95%
Average Position of motif in Targets48.8 +/- 25.7bp
Average Position of motif in Background51.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:GGTAACCACA-
-NAAACCACAG
 C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:GGTAACCACA--
--AAACCACAGC
 C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.87
Offset:2
Orientation:forward strand
Alignment:GGTAACCACA--
--AAACCACANN
 C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GGTAACCACA---
-NWAACCACADNN
 C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:GGTAACCACA---
--AAACCACAGAN
 C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GGTAACCACA-
--AAACCGCAA
 C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GGTAACCACA--
--AAACCGCAAA
 C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGTAACCACA
---ATCCAC-
 C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGTAACCACA-
CAAAAGTAAACAAAG
 A C G T A C G T A C G T A C G T C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGTAACCACA-
NDGTAAACARRN
 A C G T C A T G C T A G G C A T C T G A T C G A A G T C G T A C C T G A T G A C C G T A A C G T
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A