Information for 3-CAAGCGGCTTCAG (Motif 3)

A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G C G T A T C G A A C T G A G T C A G T C A C T G G T A C A C G T A G C T C T A G
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.841
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 29.3bp
Average Position of motif in Background60.0 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CAAGCGGCTTCAG
------GCTTCC-
 A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAAGCGGCTTCAG-----
--CNNNGCTACTGTANNN
 A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAAGCGGCTTCAG-----
--TNNTGCTACTGTNNNN
 A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CAAGCGGCTTCAG
-----NGCTN---
 A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CAAGCGGCTTCAG----
-----GGCTCYAKCAYC
 A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAGCGGCTTCAG
CATGCGGGTAC--
 A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAAGCGGCTTCAG-
----TGGTTTCAGT
 A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAAGCGGCTTCAG-
---NCCACTTCCGG
 A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAAGCGGCTTCAG
--AGCAGCTGCT-
 A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGCGGCTTCAG
AANTTCAAGTGGCTTN--
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A G T C A A C T G A G T C A C T G A C T G A G T C A C G T C G A T A G T C C G T A A C T G
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T