Information for 8-CAGAAACSAA (Motif 20)

A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A
Reverse Opposite:
A C G T C A G T A T C G A C T G C A G T A C G T A G C T A G T C G A C T C T A G
p-value:1e-6
log p-value:-1.585e+01
Information Content per bp:1.825
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif143.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets24.5 +/- 12.7bp
Average Position of motif in Background51.2 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CAGAAACSAA---
-AGAAACGAAAGT
 A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A A C G T A C G T A C G T
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CAGAAACSAA
ACTGAAACCA-
 A C G T A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CAGAAACSAA---
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAACSAA
ATAAACCGAAACCAA
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CAGAAACSAA-
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAACSAA
CAAAATCGAAACTAA
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGAAACSAA----
GAGAACCGAAACTG
 A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A A C G T A C G T A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGAAACSAA--
CGGAAGTGAAAC
 A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A A C G T A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGAAACSAA
NNTGGAAANN--
 A C G T A C G T A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGAAACSAA---
-GAAAMTGAAACT
 A G T C C T G A C T A G C T G A C G T A G T C A G T A C A T G C G T C A C G T A A C G T A C G T A C G T
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T