Information for 7-CAGCHDGGACTCTGCA (Motif 8)

A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A
Reverse Opposite:
A C G T A C T G A T G C C G T A C T A G C G T A A C T G A C G T A G T C A G T C G C T A C A T G A C T G G T A C A C G T A C T G
p-value:1e-13
log p-value:-3.168e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 32.3bp
Average Position of motif in Background45.0 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGCHDGGACTCTGCA
--GCTCGGSCTC----
 A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGCHDGGACTCTGCA-
-NNATTGGACTTTNGNN
 A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAGCHDGGACTCTGCA----
-----TGGACTTTGNNCTCN
 A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGCHDGGACTCTGCA-----
-----TGGACTTTGNNCTNTG
 A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGCHDGGACTCTGCA
DCTCAGCAGG---------
 A C G T A C G T A C G T A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGCHDGGACTCTGCA
---CNAGGCCT-----
 A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAGCHDGGACTCTGCA
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGCHDGGACTCTGCA
CACAGCAGGGGG------
 A C G T A C G T A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAGCHDGGACTCTGCA-
-----ATGACTCAGCAD
 A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAGCHDGGACTCTGCA
---CTAGGCCT-----
 A G T C C G T A A C T G G T A C G A T C C A G T A C T G A C T G T G C A A G T C A C G T A G T C A C G T A T C G A G T C C G T A
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T