Information for 4-YTGTGGTTTSWGR (Motif 3)

G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
Reverse Opposite:
G A T C G A T C C G A T T A C G G C T A C T G A C T G A A G T C A G T C T G C A A T G C C G T A C T A G
p-value:1e-25
log p-value:-5.872e+01
Information Content per bp:1.662
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif7.84%
Number of Background Sequences with motif647.0
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets52.9 +/- 23.1bp
Average Position of motif in Background51.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-YTGTGGTTTSWGR
NNTGTGGTTT----
 A C G T G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:YTGTGGTTTSWGR
CTGTGGTTTN---
 G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--YTGTGGTTTSWGR
GTCTGTGGTTT----
 A C G T A C G T G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-YTGTGGTTTSWGR
GCTGTGGTTT----
 A C G T G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--YTGTGGTTTSWGR
NNHTGTGGTTWN---
 A C G T A C G T G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-YTGTGGTTTSWGR
TTTGCGGTTT----
 A C G T G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:YTGTGGTTTSWGR
TTGCGGTTT----
 G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:YTGTGGTTTSWGR
-TGTGGATTNNN-
 G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-YTGTGGTTTSWGR
NNTGTGGATTSS--
 A C G T G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:YTGTGGTTTSWGR
--GTGGAT-----
 G A T C A C G T A T C G A C G T A C T G A C T G A G C T A G C T C G A T A T G C G C T A C T A G C T A G
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T