Information for 5-AGCCSTKAGKSTG (Motif 9)

C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G G T A C A G T C A C G T T G C A C T G A A T C G A C T G A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.727e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 29.3bp
Average Position of motif in Background34.2 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCCSTKAGKSTG
ATGCCCTGAGGC--
 A C G T C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCCSTKAGKSTG
NTGCCCTTGGGCGN
 A C G T C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGCCSTKAGKSTG
WTGSCCTSAGGS--
 A C G T C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCCSTKAGKSTG
TGCCCTNGGGCA-
 C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCCSTKAGKSTG
-BCMATTAG----
 C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G
A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCCSTKAGKSTG
TGCCCTNGGGCA-
 C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCCSTKAGKSTG
NTGCCCANNGGTNA
 A C G T C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCSTKAGKSTG
TGCCCCCGGGCA-
 C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCSTKAGKSTG
CAGCC---------
 A C G T C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGCCSTKAGKSTG-
------TWGTCTGV
 C G T A A C T G A G T C A G T C A T G C A G C T A C G T C G T A A C T G A C T G T A G C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G