Information for 6-CTCCCCACACAGMGCC (Motif 8)

A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G G T A C A C G T T G A C C G A T A C T G A C G T A T C G A G C T T A C G A C T G C T A G C T A G C G T A A T C G
p-value:1e-12
log p-value:-2.784e+01
Information Content per bp:1.731
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 25.5bp
Average Position of motif in Background49.7 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCCCCACACAGMGCC
-TCCCCA---------
 A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTCCCCACACAGMGCC
TTTCCTAGAAAGCA--
 A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CTCCCCACACAGMGCC
-------CACAGN---
 A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CTCCCCACACAGMGCC
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CTCCCCACACAGMGCC
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CTCCCCACACAGMGCC
----CCAGACAG----
 A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCCACACAGMGCC
ANNTNCCCACCCANNAC-
 A C G T A C G T A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C A C G T

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CTCCCCACACAGMGCC
TTTCCTGGAAA-----
 A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CTCCCCACACAGMGCC-
---GCCGCGCAGTGCGT
 A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C A C G T
A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.48
Offset:8
Orientation:forward strand
Alignment:CTCCCCACACAGMGCC
--------AGCGCGCC
 A T G C A C G T A G T C A G T C G T A C A G T C C T G A A T G C T G C A G T A C C G T A A C T G T G C A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C