Information for 19-TGCMGYTGCGGCCGCC (Motif 26)

A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A C T G A G T C A T G C A T C G A G T C C T G A C T A G A G T C A C G T A C T G A G T C G T C A
p-value:1e-9
log p-value:-2.143e+01
Information Content per bp:1.810
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif25.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets54.4 +/- 24.5bp
Average Position of motif in Background53.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGCMGYTGCGGCCGCC-
-----NCGCGGACGTTG
 A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TGCMGYTGCGGCCGCC
--------AGCGCGCC
 A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCMGYTGCGGCCGCC
AGATGCTRCTRCCHT-
 A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCMGYTGCGGCCGCC
CGCAGCTGCG------
 A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TGCMGYTGCGGCCGCC
--CCCCCGCCCCCGCC
 A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C
A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:TGCMGYTGCGGCCGCC------
----------GCCGCCATCTTG
 A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TGCMGYTGCGGCCGCC-----
-----TTGGGGGCGCCCCTAG
 A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

YY2/MA0748.1/Jaspar

Match Rank:8
Score:0.50
Offset:9
Orientation:forward strand
Alignment:TGCMGYTGCGGCCGCC----
---------GTCCGCCATTA
 A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TGCMGYTGCGGCCGCC
NNNNAGCAGCTGCTGAN---
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TGCMGYTGCGGCCGCC------
-----TACGCCCCGCCACTCTG
 A C G T A C T G G T A C G T C A A C T G G A T C A G C T A C T G A T G C A T C G A C T G G T A C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G