Information for 17-GCCBBTTCTTGGACTG (Motif 24)

C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A T C A G A C G T A T G C A G T C C G T A C G T A A C T G T C G A C G T A T C G A T G A C C T A G A C T G A G T C
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.790
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 13.2bp
Average Position of motif in Background44.7 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6/MA0463.1/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCCBBTTCTTGGACTG--
----TTTCCTAGAAAGCA
 C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCCBBTTCTTGGACTG
-----TTCTTGGAAAN
 C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCCBBTTCTTGGACTG---
----TTTCCTGGAAAGNNN
 C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCCBBTTCTTGGACTG
----CTTCTGGGAAA-
 C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GCCBBTTCTTGGACTG
---NTTTCTNAGAAA-
 C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G
A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GCCBBTTCTTGGACTG
--CTGTTCCTGG----
 C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCCBBTTCTTGGACTG
-NNNTTTCCTGGAAA-
 C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G
A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GCCBBTTCTTGGACTG
NNGCACCTTTCTCC-----
 A C G T A C G T A C G T C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:GCCBBTTCTTGGACTG
---TGACCTTGACCT-
 C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:GCCBBTTCTTGGACTG-
-NNNATTCCTCGAAAGN
 C T A G A G T C A G T C A C T G A C G T A C G T A G C T A G T C A C G T A C G T C T A G A T C G G T C A A G T C C G A T A C T G A C G T
A C G T A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A