Information for 16-WCCACARTAAAGATGG (Motif 23)

G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G
Reverse Opposite:
A T G C G A T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G C A G T A C T G A T C G C G A T
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.743
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 20.8bp
Average Position of motif in Background92.7 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.57
Offset:8
Orientation:forward strand
Alignment:WCCACARTAAAGATGG----
--------CAAGATGGCGGC
 G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---WCCACARTAAAGATGG
NWAACCACADNN-------
 A C G T A C G T A C G T G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:WCCACARTAAAGATGG
-NCTAAGTAAACA---
 G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G
A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:WCCACARTAAAGATGG
-NCWRWGTAAACANSV
 G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G
A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--WCCACARTAAAGATGG
AAACCACAGAN-------
 A C G T A C G T G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:WCCACARTAAAGATGG
---CCAATAAAAA---
 G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:WCCACARTAAAGATGG-
--CAAAGTAAACANNNN
 G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G A C G T
A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---WCCACARTAAAGATGG
NAAACCACAG---------
 A C G T A C G T A C G T G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--WCCACARTAAAGATGG
AAACCACAGC--------
 A C G T A C G T G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:WCCACARTAAAGATGG-
-----AGAAACGAAAGT
 G C T A T A G C G T A C G C T A G T A C C G T A C T A G G A C T G T C A C G T A G T C A A C T G C G T A C G A T C A T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T