Information for 4-CCAGGCCGGGGGG (Motif 3)

A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A T G C G T A C A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C T G
p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.904
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.3 +/- 31.1bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCAGGCCGGGGGG--
-CAGGCCNNGGCCNN
 A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAGGCCGGGGGG
CTAGGCCT-----
 A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCAGGCCGGGGGG--
---TGCCCNGGGGCA
 A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGCCGGGGGG-
NCCCCCCCGGGGGGN
 A C G T A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGCCGGGGGG-
ACCCCCCCGGGGGGN
 A C G T A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAGGCCGGGGGG--
-CACAGCGGGGGGTC
 A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCAGGCCGGGGGG--
---TGTCAGGGGGCG
 A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCAGGCCGGGGGG
---GGGGGGGG--
 A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G
A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCAGGCCGGGGGG-
CCCCCCCGGGGGNN
 A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAGGCCGGGGGG
CNAGGCCT-----
 A G T C A G T C G T C A A C T G A C T G G T A C A G T C C T A G A C T G A T C G A C T G A C T G A C T G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T