Information for 3-TGGGAAGGCCCCT (Motif 3)

A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
Reverse Opposite:
G T C A C T A G C A T G C T A G A T C G A G T C G A T C A G C T A C G T A G T C A G T C A G T C G T C A
p-value:1e-11
log p-value:-2.728e+01
Information Content per bp:1.771
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif34.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.2 +/- 24.3bp
Average Position of motif in Background50.4 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGGGAAGGCCCCT
-GGGAAATCCCCN
 A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAGGCCCCT
CSTGGGAAAD-----
 A C G T A C G T A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGGGAAGGCCCCT
TGGGGAAGGGCM--
 A C G T A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGGGAAGGCCCCT
--GGAAANCCCC-
 A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGGAAGGCCCCT
--GGAAATCCCC-
 A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGGAAGGCCCCT
AGGGGATTCCCCT
 A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGGAAGGCCCCT
AGGGGATTCCCCT
 A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGGAAGGCCCCT
GGGGGAATCCCC-
 A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGGGAAGGCCCCT
TATTATGGGATGGATAA-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A A C G T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGGGAAGGCCCCT
--GGAAATTCCC-
 A C G T C T A G T C A G C T A G T C G A C T G A C A T G C T A G A T G C A G T C G A T C G A T C A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T