Information for 3-GTCCTGGGCCACTCAG (Motif 10)

A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G C G T A T G A C
p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 23.7bp
Average Position of motif in Background58.0 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GTCCTGGGCCACTCAG-
------AGCCACTCAAG
 A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GTCCTGGGCCACTCAG------
----TGGACCAATCAGCACTCT
 A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCCTGGGCCACTCAG
-AAATGGACCAATCAG
 A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G
A C G T T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GTCCTGGGCCACTCAG-
-----GGACCACCCACG
 A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GTCCTGGGCCACTCAG
------AASCACTCAA
 A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCCTGGGCCACTCAG
WDNCTGGGCA------
 A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GTCCTGGGCCACTCAG
------AGCCAATCGG
 A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTCCTGGGCCACTCAG
---ACTAGCCAATCA-
 A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G
A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GTCCTGGGCCACTCAG
------MRSCACTYAA
 A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTCCTGGGCCACTCAG----
---CTTAACCACTTAAGGAT
 A C T G A C G T A G T C G T A C C G A T A C T G A C T G A T C G A G T C G T A C C G T A G T A C A C G T A G T C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T