Information for 1-AGGGTCCCTG (Motif 6)

C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G
Reverse Opposite:
T G A C C T G A A T C G C T A G A T C G T C G A A T G C G T A C G A T C G A C T
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.645
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif12.02%
Number of Background Sequences with motif2840.4
Percentage of Background Sequences with motif5.81%
Average Position of motif in Targets52.5 +/- 23.1bp
Average Position of motif in Background49.8 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGGGTCCCTG
NRRGGGTCTT--
 A C G T A C G T C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGGGTCCCTG---
-AGGTCTCTAACC
 C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G A C G T A C G T A C G T
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGGTCCCTG-
-CTGTTCCTGG
 C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGGTCCCTG
GTGGGCCCCA-
 A C G T C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGGTCCCTG----
NAGGTCANTGACCT
 C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G A C G T A C G T A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGGTCCCTG
-AGGTCA---
 C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGGTCCCTG-
AGGGTAACAGC
 C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G A C G T
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGGGTCCCTG-
GTCACGCTCNCTGA
 A C G T A C G T A C G T C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGGGTCCCTG
BNTGDCCTTG
 C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AGGGTCCCTG-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G C A T G T A C G A G C T T A G C G A T C T A G C G A C T A C T G A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A