Information for 3-TCCCACCGCCTCA (Motif 4)

A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A A C T G A C T G A G T C A C T G A C T G A G C T C T A G A C T G C T A G C G T A
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 26.6bp
Average Position of motif in Background39.8 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCCCACCGCCTCA
CCCCCGCCCCCGCC
 A C G T A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCCCACCGCCTCA----
TCACCCCGCCCCAAATT
 A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A A C G T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCCACCGCCTCA--
-TCCGCCCCCGCATT
 A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A A C G T A C G T
A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCCCACCGCCTCA-
GCCCCGCCCCCTCCC
 A C G T A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCCCACCGCCTCA
GCCCCGCCCCC---
 A C G T A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCCACCGCCTCA--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCCCACCGCCTCA
NYTTCCCGCC------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCCCACCGCCTCA----
-ATCCCCGCCCCTAAAA
 A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A A C G T A C G T A C G T A C G T
A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCCCACCGCCTCA
NCTTCCCGCCC-----
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCCCACCGCCTCA---
TACGCCCCGCCACTCTG
 A C G T A C G T A G T C A G T C A G T C C T G A G T A C A G T C A C T G A G T C A G T C A C G T A T G C C G T A A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G