Information for 2-GAGAGAGGAGAGG (Motif 3)

A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T A T G C A C G T A G T C G T A C A C G T A T G C A C G T A G T C A C G T A T G C
p-value:1e-11
log p-value:-2.704e+01
Information Content per bp:1.870
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.5 +/- 21.8bp
Average Position of motif in Background45.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGAGAGGAGAGG
GGAGAAAGGTGCGA
 A C G T A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------GAGAGAGGAGAGG
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGAGAGGAGAGG
-AGAAACGAAAGT
 A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAGAGAGGAGAGG
--GGGAGGACNG-
 A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GAGAGAGGAGAGG-----
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGAGAGGAGAGG
-AAAGATCAAAGG
 A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAGAGAGGAGAGG
---AGAGGAA---
 A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G
A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGAGAGGAGAGG
NNGAGATAAGA--
 A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGAGAGGAGAGG---
-AAAGATCAAAGGGTT
 A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAGAGAGGAGAGG
-ANAGATAAGAA-
 A T C G C G T A C T A G C G T A A T C G C G T A A C T G A C T G C G T A A T C G T G C A A C T G A C T G
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T