Information for 1-GAGCCTGGGCCTCCCC (Motif 2)

A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C
Reverse Opposite:
A C T G A C T G A C T G C T A G C G T A A C T G C A T G A G T C A G T C A G T C C T G A A C T G A C T G G T A C A C G T A T G C
p-value:1e-13
log p-value:-3.124e+01
Information Content per bp:1.867
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.9 +/- 24.6bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAGCCTGGGCCTCCCC
GGGGCCGAGGCCTG---
 A C G T A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAGCCTGGGCCTCCCC
-TGCCTGCGYCMCCTT
 A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GAGCCTGGGCCTCCCC-
-----GGGGATTCCCCC
 A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGCCTGGGCCTCCCC
GAGSCCGAGC------
 A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAGCCTGGGCCTCCCC
----CTAGGCCT----
 A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGCCTGGGCCTCCCC
-WDNCTGGGCA-----
 A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GAGCCTGGGCCTCCCC--
------KGCCCTTCCCCA
 A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAGCCTGGGCCTCCCC
----CNAGGCCT----
 A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAGCCTGGGCCTCCCC-
----AGGGGATTCCCCT
 A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GAGCCTGGGCCTCCCC-
----AGGGGATTCCCCT
 A T C G C G T A A C T G G T A C A G T C A G C T A C T G A C T G A C T G G A T C A G T C A C G T A G T C A G T C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T