Information for 7-ATGCTCACAA (Motif 13)

G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G A G C T A C T G C G T A A C T G A G T C C G T A C G A T
p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.840
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif73.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets54.9 +/- 17.5bp
Average Position of motif in Background46.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATGCTCACAA----
CGAAGCACACAAAATA
 A C G T A C G T G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATGCTCACAA
AATTTGCTGAC--
 A C G T A C G T A C G T G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATGCTCACAA
AAAATGCTGACT-
 A C G T A C G T A C G T G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATGCTCACAA---
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A C G T G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTCACAA-
AAAWWTGCTGACWWD
 A C G T A C G T A C G T A C G T G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ATGCTCACAA-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTCACAA---
ATTTGCATACAATGG
 A C G T A C G T G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGCTCACAA-
GGTGYTGACAGS
 A C G T G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATGCTCACAA-
-TGCTGACTCA
 G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A A C G T
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGCTCACAA
-NGCTN----
 G C T A C G A T A C T G A G T C C G A T T G A C T C G A T G A C C G T A C T G A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T