Information for 6-ACTGGGAACA (Motif 12)

C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A
Reverse Opposite:
A C G T C T A G A G C T C A G T T A G C G A T C A G T C C G T A A T C G G A C T
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.778
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif279.5
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets52.7 +/- 27.0bp
Average Position of motif in Background46.9 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ACTGGGAACA
WDNCTGGGCA--
 A C G T A C G T C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ACTGGGAACA
CSTGGGAAAD
 C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ACTGGGAACA-
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACTGGGAACA-
-CCAGGAACAG
 C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACTGGGAACA-
SCCTAGCAACAG
 A C G T C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTGGGAACA---
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACTGGGAACA---
---TGGAACAGMA
 C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTGGGAACA
AATGGAAAAT
 C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTGGGAACA
NGTGGGCAT-
 C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTGGGAACA----
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T C T G A A T G C A C G T A C T G C T A G A T C G G T C A T C G A G A T C C G T A A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A