Information for 5-GGGACAAGAC (Motif 11)

A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C
Reverse Opposite:
A C T G G A C T A G T C A G C T A C G T A C T G A G C T A G T C A G T C A T G C
p-value:1e-9
log p-value:-2.116e+01
Information Content per bp:1.842
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif230.8
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets49.7 +/- 23.5bp
Average Position of motif in Background48.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGGACAAGAC---
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGGACAAGAC
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGGACAAGAC-
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GGGACAAGAC-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGACAAGAC
NNGAGATAAGA-
 A C G T A C G T A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGACAAGAC
TGGAAAA---
 A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGACAAGAC
TGGGGA------
 A C G T A C G T A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGACAAGAC
CAGATAAGGN
 A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGACAAGAC
TGGAACAGMA
 A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGGACAAGAC
CCAGGAACAG---
 A C G T A C G T A C G T A T C G A C T G A C T G C T G A T G A C G T C A C T G A A C T G C T G A T G A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T