Information for 1-AGGCCCACAGCGC (Motif 1)

C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C
Reverse Opposite:
A C T G A G T C A C T G A G T C C G A T A C T G C G A T A C T G A C T G A C T G A G T C A G T C A G C T
p-value:1e-16
log p-value:-3.730e+01
Information Content per bp:1.940
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.4 +/- 16.3bp
Average Position of motif in Background82.4 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AGGCCCACAGCGC
-----CACAGN--
 C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCCACAGCGC
TGGGGCCCAC-----
 A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGCCCACAGCGC-
-TGCCCNNAGGGCA
 C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGCCCACAGCGC-
-TGCCCTNAGGGCA
 C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGGCCCACAGCGC-
-TGCCCTNAGGGCA
 C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCCACAGCGC
CTAGGCCT-------
 A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGCCCACAGCGC
AGGCCTNG-----
 C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGCCCACAGCGC
-AAACCACAGAN-
 C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGCCCACAGCGC
-AAACCACAGC--
 C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGCCCACAGCGC
NWAACCACADNN-
 C T G A A C T G A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C T G G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T