Information for 10-WAGGCTSCAGGAC (Motif 19)

C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C A C G T A C T G A T C G C G T A A C T G A G T C A G T C A C G T C G A T
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.8 +/- 20.7bp
Average Position of motif in Background69.4 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:WAGGCTSCAGGAC-
--GGCTCYAKCAYC
 C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:WAGGCTSCAGGAC
--NGCTN------
 C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:WAGGCTSCAGGAC---
-AAGTTCAAGGTCAGC
 C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:WAGGCTSCAGGAC--
-----ANCAGGATGT
 C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:WAGGCTSCAGGAC-
--AGGTCAAGGTCA
 C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-WAGGCTSCAGGAC-
BCNGGTTCTAGANCN
 A C G T C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:WAGGCTSCAGGAC-
--AGGTCAAGGTCA
 C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:WAGGCTSCAGGAC-
----NTCAAGGTCA
 C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:WAGGCTSCAGGAC
TWGTCTGV-----
 C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---WAGGCTSCAGGAC-
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T C G T A G T C A A C T G A C T G A G T C C G A T A T G C G T A C C G T A A C T G A C T G C G T A A G T C A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C