Information for 9-TGCTAGTTTA (Motif 39)

A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A A G T C A C G T C G T A A C T G A G T C C G T A
p-value:1e-6
log p-value:-1.485e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.3 +/- 23.8bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGCTAGTTTA-----
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGCTAGTTTA----
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCTAGTTTA-
-ACTAGTTAAC
 A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

FOXG1/MA0613.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCTAGTTTA-
---TTGTTTAC
 A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

Foxj2/MA0614.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGCTAGTTTA-
---TTGTTTAC
 A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCTAGTTTA-----
TTCTATTTTTAGNNN
 A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCTAGTTTA---
-SCHTGTTTACAT
 A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCTAGTTTA
TGGCAGTTGN
 A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCTAGTTTA-
-NVWTGTTTAC
 A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T
A C G T A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCTAGTTTA----
--CBTGTTTAYAWW
 A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T