Information for 17-TGGATACCAAGAC (Motif 37)

C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C
Reverse Opposite:
C T A G A G C T T A G C C G A T G A C T C T A G A T C G C A G T C G T A A C G T A G T C G A T C G T C A
p-value:1e-6
log p-value:-1.598e+01
Information Content per bp:1.698
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif78.2
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets61.3 +/- 26.9bp
Average Position of motif in Background49.3 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGATACCAAGAC
ATGTCACAACAACAC
 A C G T A C G T C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

IRF8/MA0652.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGATACCAAGAC-
TCGAAACCGAAACT
 C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGATACCAAGAC--
-GCAAAACATTACTA
 C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C A C G T A C G T
A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGGATACCAAGAC------
--CAAATCCAGACATCACA
 C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TGGATACCAAGAC--
-------CCAGACAG
 C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

IRF9/MA0653.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGATACCAAGAC-
AACGAAACCGAAACT
 A C G T C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TGGATACCAAGAC----
-------CCAGACRSVB
 C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGATACCAAGAC------
-GGAAAGCGAAACCAAAAC
 C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGATACCAAGAC
-AGATAASR----
 C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGGATACCAAGAC
CTACTTGGATACGGAAT-
 A C G T A C G T A C G T A C G T A C G T C A G T C T A G C T A G C G T A A C G T G C T A T A G C A G T C C T G A C G T A A C T G C T G A A G T C
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T A C G T