Information for 16-AATAAGCCCAAAG (Motif 34)

C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A C T G C T A G A C T G A T G C A G C T A C G T C G T A A G C T A C G T
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.7 +/- 27.8bp
Average Position of motif in Background50.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf7/MA0769.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AATAAGCCCAAAG-
--AAAGATCAAAGG
 C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

LEF1/MA0768.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AATAAGCCCAAAG----
--AAAGATCAAAGGGTT
 C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AATAAGCCCAAAG----
--AGAGTCCAAAGTCCA
 C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AATAAGCCCAAAG---
--AAAGATCAAAGGAA
 C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AATAAGCCCAAAG----
-CANAGNNCAAAGTCCA
 C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AATAAGCCCAAAG-----
-NANAGATCAAAGGGNNN
 C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AATAAGCCCAAAG---
----ACATCAAAGGNA
 C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AATAAGCCCAAAG-
----ACATCAAAGG
 C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AATAAGCCCAAAG-----
-NNNAGATCAAAGGANNN
 C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AATAAGCCCAAAG-----
-TATAGATCAAAGGAAAA
 C G T A C T G A G C A T C G T A C T G A A T C G A G T C A G T C G T A C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A