Information for 13-ATGGATTCCTACG (Motif 28)

G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G
Reverse Opposite:
T A G C T A C G C G A T C G T A C T A G A C T G G T C A G T C A C G A T A T G C A G T C C G T A A C G T
p-value:1e-7
log p-value:-1.842e+01
Information Content per bp:1.748
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.3 +/- 24.1bp
Average Position of motif in Background41.5 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------ATGGATTCCTACG
TNNATTATGCATANNTT--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---ATGGATTCCTACG
ATGATKGATGRC----
 A C G T A C G T A C G T G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:ATGGATTCCTACG
--RCATTCCWGG-
 G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G
A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:ATGGATTCCTACG
GTGGAT-------
 G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:ATGGATTCCTACG
--GCATTCCAGN-
 G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:ATGGATTCCTACG
ATTGATTYND---
 G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---ATGGATTCCTACG
GTCATGCHTGRCTGS-
 A C G T A C G T A C G T G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:ATGGATTCCTACG-----
-TGAATTCCTAGAAAGCA
 G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---ATGGATTCCTACG
NNTGTGGATTSS----
 A C G T A C G T A C G T G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:forward strand
Alignment:ATGGATTCCTACG
---HTTTCCCASG
 G T C A A C G T A C T G T A C G G C T A A C G T A C G T G T A C G A T C A C G T C G T A A T G C A T C G
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G