Information for 17-AATGWSCAWTYTCYMA (Motif 25)

C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A
Reverse Opposite:
C G A T A C T G C T G A A T C G C G T A C T G A C G T A C G T A A C G T A C T G T A G C C G T A A G T C C G T A A C G T A C G T
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.8 +/- 25.0bp
Average Position of motif in Background59.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AATGWSCAWTYTCYMA
GGCAAAAGTCCAATAA----
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AATGWSCAWTYTCYMA
AAGTCAGCANTTTTN--
 A C G T C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AATGWSCAWTYTCYMA
AAATTAGCATAAT----
 A C G T C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AATGWSCAWTYTCYMA
AACAATGTGCAGTGTT---
 A C G T A C G T A C G T C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.52
Offset:8
Orientation:forward strand
Alignment:AATGWSCAWTYTCYMA--
--------HTTTCCCASG
 C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AATGWSCAWTYTCYMA
CTAATTTGCATATT----
 A C G T A C G T C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AATGWSCAWTYTCYMA
AATTTGCATANT----
 C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AATGWSCAWTYTCYMA
--TGACCTTTGCCCCA
 C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AATGWSCAWTYTCYMA
BTVATTWGCATA------
 A C G T A C G T C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AATGWSCAWTYTCYMA
TAATTTGCATAA-----
 A C G T C G T A C G T A A C G T C T A G C G A T A T C G A G T C C G T A C G A T A C G T A G C T A C G T A T G C A G C T G T A C C G T A
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T