p-value: | 1e-8 |
log p-value: | -2.058e+01 |
Information Content per bp: | 1.844 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.63% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 43.2 +/- 21.6bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTWTSAAWRTTTMTAR CTCATGAATATTCAT-- |
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Arid5a/MA0602.1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTWTSAAWRTTTMTAR NNTNNCAATATTAG--- |
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PB0002.1_Arid5a_1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTWTSAAWRTTTMTAR NNTNNCAATATTAG--- |
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Foxq1/MA0040.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTWTSAAWRTTTMTAR ----TATTGTTTATT- |
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OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTWTSAAWRTTTMTAR AYATGYATATGCATR- |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTWTSAAWRTTTMTAR -TTTGAAACCG----- |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTWTSAAWRTTTMTAR --ATGAATATTC---- |
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PB0198.1_Zfp128_2/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTWTSAAWRTTTMTAR- ---TGTATATATATACC |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTWTSAAWRTTTMTAR NNTNTCATGAATGT------ |
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LIN54/MA0619.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTWTSAAWRTTTMTAR ATTTGAATT------- |
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