Information for 11-CCGGGAGGCDCCCGCC (Motif 19)

A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G G T A C C T A G A C T G A T C G G C T A A C T G A G T C A T G C A C G T A T G C A G T C A T G C A C T G A C T G
p-value:1e-10
log p-value:-2.309e+01
Information Content per bp:1.836
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.2 +/- 14.0bp
Average Position of motif in Background22.0 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CCGGGAGGCDCCCGCC-
-------GGTCCCGCCC
 A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCGGGAGGCDCCCGCC
TGCCCCCGGGCA------
 A C G T A C G T A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCGGGAGGCDCCCGCC
TGCCCCAGGGCA------
 A C G T A C G T A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CCGGGAGGCDCCCGCC-
------NCTTCCCGCCC
 A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCGGGAGGCDCCCGCC
TGCCCCAGGGCA------
 A C G T A C G T A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CCGGGAGGCDCCCGCC-
-----SNGCACCTGCHS
 A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCGGGAGGCDCCCGCC--
---AGATGCTRCTRCCHT
 A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCGGGAGGCDCCCGCC
NNNGGGGCGCCCCCNN-
 A C G T A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CCGGGAGGCDCCCGCC
--------CCCCCCCC
 A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C

HES7/MA0822.1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CCGGGAGGCDCCCGCC-
-----TGGCACGTGCCA
 A G T C A G T C A T C G A C T G A T C G G T C A A T C G A C T G A G T C C A G T A T G C A G T C A G T C A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A