Information for 19-GRGACAGAGGYGG (Motif 39)

A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G
Reverse Opposite:
A G T C A G T C C T G A A G T C A G T C A G C T A G T C C G A T A C T G A C G T A G T C A G T C A G T C
p-value:1e-7
log p-value:-1.736e+01
Information Content per bp:1.853
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.7 +/- 21.2bp
Average Position of motif in Background58.0 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GRGACAGAGGYGG---
-GGGNGGGGGCGGGGC
 A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G A C G T A C G T A C G T
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GRGACAGAGGYGG---
-----GGGGGCGGGGC
 A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GRGACAGAGGYGG----
-NNTNAGGGGCGGNNNN
 A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GRGACAGAGGYGG-----
----AGGGGGCGGGGCTG
 A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GRGACAGAGGYGG-----
-NNTNNGGGGCGGNGNGN
 A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GRGACAGAGGYGG
GGGGCCCAAGGGGG
 A C G T A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GRGACAGAGGYGG------
--NAGANTGGCGGGGNGNA
 A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GRGACAGAGGYGG----
NNNAAGGGGGCGGGNNN
 A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GRGACAGAGGYGG---
--GGCGGGGGCGGGGG
 A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GRGACAGAGGYGG
AGGGGTCAGAGGTCA
 A C G T A C G T A C T G C T A G A C T G G T C A G T A C C G T A A C T G C T G A A C T G A C T G A G C T A C T G A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A