Information for 17-GBTTKSAGAADTC (Motif 35)

A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C
Reverse Opposite:
C A T G C T G A G T C A C A G T C G A T A G T C C G A T A T G C G T C A T G C A C T G A T G A C A T G C
p-value:1e-8
log p-value:-1.899e+01
Information Content per bp:1.704
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif47.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets40.4 +/- 17.3bp
Average Position of motif in Background55.7 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GBTTKSAGAADTC-
CAATTGCAAAAATAT
 A C G T A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GBTTKSAGAADTC
-ATTGCACAATA-
 A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GBTTKSAGAADTC
TTTCTNAGAAAN-
 A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GBTTKSAGAADTC
AGGTGHCAGACA--
 A C G T A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GBTTKSAGAADTC
CGGTTTCAAA----
 A C G T A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GBTTKSAGAADTC
-VTTRCATAAY--
 A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GBTTKSAGAADTC
AGGTGNCAGACAG-
 A C G T A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GBTTKSAGAADTC
TGGTTTCAGT----
 A C G T A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GBTTKSAGAADTC------
--AAGGCGAAATCATCGCA
 A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GBTTKSAGAADTC
GAAAAGGTGTGAAAATT-
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G A G C T A C G T C A G T A T C G C G T A T C A G C G T A G T C A C A G T G A C T G T A C
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T