Information for 10-CSACGCYMGACCY (Motif 19)

A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C
Reverse Opposite:
C T A G C T A G A C T G A C G T A G T C C A T G C T A G C T A G G T A C A C T G A C G T A T C G A C T G
p-value:1e-10
log p-value:-2.420e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets25.7 +/- 17.5bp
Average Position of motif in Background55.0 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CSACGCYMGACCY---
---CNNTTGACCTTTG
 A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CSACGCYMGACCY
--ATGCCAGACN-
 A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CSACGCYMGACCY
GACCACGCCCTTATT
 A C G T A C G T A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CSACGCYMGACCY
-CACGCA------
 A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CSACGCYMGACCY----
CAAATCCAGACATCACA
 A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CSACGCYMGACCY-
----GCCACACCCA
 A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CSACGCYMGACCY--
TGACCTCTGACCCCN
 A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CSACGCYMGACCY
GCCACGCCCCC---
 A C G T A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CSACGCYMGACCY
-------TGACCT
 A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CSACGCYMGACCY-
----GCCMCRCCCH
 A G T C A T G C C G T A A G T C A C T G A G T C A G T C G T A C A C T G G T C A A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T