Information for 4-AAATAGTGAAGCT (Motif 13)

G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T
Reverse Opposite:
C T G A A T C G T A G C A C G T A C G T A T G C G C T A A T G C G A C T T G C A C G A T A C G T C A G T
p-value:1e-11
log p-value:-2.743e+01
Information Content per bp:1.654
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif282.8
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets43.2 +/- 24.9bp
Average Position of motif in Background49.6 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAATAGTGAAGCT
NNAATTAGTCACGGT
 A C G T A C G T G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AAATAGTGAAGCT
------NGAAGC-
 G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAATAGTGAAGCT
CCAAAAATAG-------
 A C G T A C G T A C G T A C G T G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAATAGTGAAGCT
AGGTTAATTAGCTGAT--
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:AAATAGTGAAGCT--
--------AAGCTTG
 G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PH0039.1_Mnx1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAATAGTGAAGCT
GTACTAATTAGTGGCG--
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAATAGTGAAGCT
DCYAAAAATAGM------
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AAATAGTGAAGCT
AAAGCTAATTAGCGAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AAATAGTGAAGCT
KCCAAAAATAGC------
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0021.1_Dlx2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AAATAGTGAAGCT
GGAATAATTACCTCAG--
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A G C T A A C G T C G T A T A C G C G A T A T C G T G C A C G T A A T C G T A G C A G C T
T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G A C G T A C G T